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Marker details for NAM_SNP2

Crop Name PEA
Site Western Regional PI Station
Repeat Motif A/C
Polymorphic Type SEQ/SNP
Comment No Apical Meristem protein

Citation(s)

Assay details for evaluation PEA.SNP.GENOTYPING.2015
Evaluation Method
25 ng genomic DNA was used as template for SNP genotyping carried out using a MALDI-TOF mass spectrometer (Sequenom). SNP assays were designed from previously published SNPs (Deulvot et al. 2010, BMC Genomics 11:486) using software iPLEX GOLD Assay (Sequenom). The data was analyzed with MassArray analyzer software (Sequenom) which called the biallelic markers. Each SNP was scored for each sample A, T, G or C.

An Excel file with the markers and genotypes