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Marker details for ELSA_SNP3

Crop Name PEA
Site Western Regional PI Station
Repeat Motif A/G
Polymorphic Type SEQ/SNP
Comment Early leaf senescence abundant cysteine protease (elsa)

Citation(s)

Assay details for evaluation PEA.SNP.GENOTYPING.2015
Evaluation Method
25 ng genomic DNA was used as template for SNP genotyping carried out using a MALDI-TOF mass spectrometer (Sequenom). SNP assays were designed from previously published SNPs (Deulvot et al. 2010, BMC Genomics 11:486) using software iPLEX GOLD Assay (Sequenom). The data was analyzed with MassArray analyzer software (Sequenom) which called the biallelic markers. Each SNP was scored for each sample A, T, G or C.

An Excel file with the markers and genotypes