Details for: PI 635480, Humulus lupulus L. var. neomexicanus A. Nelson & Cockerell, Pecos #2 Female

Summary Data

Taxonomy:

Humulus lupulus L. var. neomexicanus A. Nelson & Cockerell

Top Name:

Pecos #2 Female

Origin:

Collected – New Mexico, United States

Maintained:

National Clonal Germplasm Repository

Received by NPGS:

10 Sep 2002

Improvement Status:

Wild material

Reproductive Uniformity:

Population

Form Received:

Plant

Availability

This accession is not available. Contact site for status.

National Clonal Germplasm Repository

Due to a recent decrease in resources, we are in the process of restructuring our distribution and are not able to accept requests for this material at this time.

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Core Passport Data

Taxonomy:

Humulus lupulus L. var. neomexicanus A. Nelson & Cockerell

Top Name:

Pecos #2 Female

Origin:

Collected – New Mexico, United States

Maintained:

National Clonal Germplasm Repository

Received by NPGS:

10 Sep 2002

Improvement Status:

Wild material

Reproductive Uniformity:

Population

Form Received:

Plant

Source History

Collected

19 September 2002.
New Mexico, United States
Locality: North of Pecos, along State Highway 63 At Bert Clancy Recreation site in field between the river and road
Coordinates: 35.7367, -105.6781 (Map it)
Elevation: 2354m.
Georeference protocol: Lat/lon determined by GPS
Habitat: Wild Habitat
Environment description: With Abies concolor, Pinus pondorosa and Salix sp.

Collector(s):

Donated

10 September 2002.
Oregon, United States

Donor(s):

Oliphant, James, USDA, ARS

Accession Names and Identifiers

Pecos #2 Female

Type: Collector identifier

Group: OTHERNUM

other identifier

Oliphant, James USDA, ARS

OCJ-59

Type: Collector identifier

Group: OTHERNUM

other identifier

H. lupulus var. neomexicanus OCJ-59

Type: Site identifier

Group: SPECIES

accession preserved for genes

KH0902

Type: Exploration identifier

Group: PEO-EXPLORATIONS

Exploration ID links

CHUM 1386

Type: Site identifier

Group: LOCAL

Corvallis local number

Narrative

Humulus lupulus L. var. neomexicanus A. Nelson & Cockerell

Genus:

Humulus

Family:

Cannabaceae

Nomen number:

415435

Place of publication:

Proc. Biol. Soc. Washington 16:45. 1903

Verified:

11/10/1999 by ARS Systematic Botanists.

Other conspecific taxa

Humulus lupulus L. (10 active accession[s])
Humulus lupulus L. var. cordifolius (Miq.) Maxim. (1 active accession[s])
Humulus lupulus L. var. lupuloides E. Small (143 active accession[s])
Humulus lupulus L. var. lupulus (236 active accession[s])
Humulus lupulus L. var. pubescens E. Small (10 active accession[s])

Autonyms (not in current use), synonyms and invalid designations

Common names

Annotations

Observations

Phenotype Data

Category	Descriptor	Description	Value	Study	Inventory	Availability
MOLECULAR	HI_AGA7	Motif: (CAT)3N3(CTT)9N3(CTT)3 F: ACAAGCAGTAATGATGAGGA R: TCCAAGTCTCTCAATTAGGAA	215:218	Driskill et al. 2021 unpublished-SSR data	CHUM 1386 .001 PL	Not Available
MOLECULAR	K10315842	Motif: (TGG)8 F: CTCAACTACCCTCTCGTCTG R: TAGCTGGAATGAGCGAAGTA	279	Driskill et al. 2021 unpublished-SSR data	CHUM 1386 .001 PL	Not Available
MOLECULAR	K10315910	Motif: (CTT)7 F: GATAGCCAATCTGGTATGGA R: GGGTAACGAAATCCCTAACT	362	Driskill et al. 2021 unpublished-SSR data	CHUM 1386 .001 PL	Not Available
MOLECULAR	K10316221 pig	Motif: (TCT)7 F: GTTGTTCTCTTCCAACCAAG Rp: GTTTCCAAAGAAGACCCATTACAG	119	Driskill et al. 2021 unpublished-SSR data	CHUM 1386 .001 PL	Not Available
MOLECULAR	Hop Primer 1	Motif: (CTT)n F: AACAAGCTCTGGTAATAACAACAT R: AAAACAAGAACCAGAGATAAGGAC	244:253	Driskill et al. 2021 unpublished-SSR data	CHUM 1386 .001 PL	Not Available
MOLECULAR	Hop Primer 6	Motif: T/A, GAA/TTC F: AAAGCGAAAACTCATGAAAAGGTT R: GACACATGTAAGGTGACCTTTACA	228	Driskill et al. 2021 unpublished-SSR data	CHUM 1386 .001 PL	Not Available
MOLECULAR	K10315931 pig	Motif: (CTT)7 F: TCTCCCTAAATGCTATTGTCA Rp: GTTTCGATCATTAGGGTTGAATC	309	Driskill et al. 2021 unpublished-SSR data	CHUM 1386 .001 PL	Not Available
MOLECULAR	K10316016	Motif: (AAT)5 F: TACAGGTGCAGTAGCTCAAA R: ATCAAGCTCCTCTAAACCCT	397	Driskill et al. 2021 unpublished-SSR data	CHUM 1386 .001 PL	Not Available
MOLECULAR	ACA1-K9-3	Motif: (TTC)17 F: ATCCTTCTCTCATTACATACTCAGC R: CCTATGACGGTTCTTATGAGTGC	156	Driskill et al. 2021 unpublished-SSR data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 000089F_317093	KASP Assay Primer Allele X: GAGCTCCAGGCTGCCAG KASP Assay Primer Allele Y: GCTGAGCTCCAGGCTGCCAA KASP Assay Primer Common: TTTTGGCAGTTCGCTCAGCGGTTA	NA	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 000265F_1374141	KASP Assay Primer Allele X: AAATTATGTGACTCGGGATAGTAAGGT KASP Assay Primer Allele Y: ATGTGACTCGGGATAGTAAGGC KASP Assay Primer Common: GAGCTATCAAGCAGGCCGTGCA	A/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 000571F_797591	KASP Assay Primer Allele X: GAGACCGCATGAAGCGACGTA KASP Assay Primer Allele Y: GAGACCGCATGAAGCGACGTC KASP Assay Primer Common: CCGCCGTGGCCACGCTCAA	C/C	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 001644F_470045	KASP Assay Primer Allele X: CCGATCCCGGCTCCCAGA KASP Assay Primer Allele Y: CCGATCCCGGCTCCCAGC KASP Assay Primer Common: GGGACGGCAGCTGCGGCTT	C/C	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 002381F_371663	KASP Assay Primer Allele X: ACCGCAGCCTGAGACCGGT KASP Assay Primer Allele Y: CCGCAGCCTGAGACCGGC KASP Assay Primer Common: CAATTCACGACGAGTAGTAGTACTACTAT	A/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 003591F_48935	KASP Assay Primer Allele X: GAGCAGAACGGCGACTTTGAGA KASP Assay Primer Allele Y: GAGCAGAACGGCGACTTTGAGT KASP Assay Primer Common: CTTGCGCTGCACCATGCCTCAT	A/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 008739F_51678	KASP Assay Primer Allele X: CAGCGATCCAATTACAGCAACATG KASP Assay Primer Allele Y: GCAGCGATCCAATTACAGCAACATA KASP Assay Primer Common: CGGTTGAAAACATCTCATTTCGTCACTAA	C/C	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 000115F_1068460	KASP Assay Primer Allele X: CGATAGCAGAACATTATAACCTCTATTC KASP Assay Primer Allele Y: CGATAGCAGAACATTATAACCTCTATTT KASP Assay Primer Common: GAACTTGCCGCAAAGCAGCTCCTT	C/C	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 001589F_351349	KASP Assay Primer Allele X: CACCAGAAAGTGTCGATTCCCAT KASP Assay Primer Allele Y: CACCAGAAAGTGTCGATTCCCAC KASP Assay Primer Common: CGGTGTCATAGCAGCTGGGTGTT	A/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 002878F_402249	KASP Assay Primer Allele X: GGAGGCAGGGTCTACTGTTGTA KASP Assay Primer Allele Y: GGAGGCAGGGTCTACTGTTGTT KASP Assay Primer Common: AGCTAAACCAATTGAGCCCAATCCAAAA	T/T	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 003765F_59789	KASP Assay Primer Allele X: GCCGTTGGTTGGTTTAGTCGGAA KASP Assay Primer Allele Y: CCGTTGGTTGGTTTAGTCGGAC KASP Assay Primer Common: CCACCCCATCATCCCCCACTTA	A/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 23F_2218589	KASP Assay Primer Allele X: AACAAGATCAGCATCAGCACAGACA KASP Assay Primer Allele Y: CAAGATCAGCATCAGCACAGACC KASP Assay Primer Common: CTGCTGACCATTACTACTCAGATCATTA	A/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 63_359415F	KASP Assay Primer Allele X: GCTTTGTGGTTGGCTAGAC KASP Assay Primer Allele Y: GGCTGCTTTGTGGTTGGCTAGAT KASP Assay Primer Common: CAGGCAGCCCTTCCAAGCAGAA	NA	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 122F_1097361	KASP Assay Primer Allele X: CAGCTACGCCTCGGCGTCAA KASP Assay Primer Allele Y: CAGCTACGCCTCGGCGTCAT KASP Assay Primer Common: GAGAGCTGCAGCGTGGAGTCAA	A/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 198F_1478737	KASP Assay Primer Allele X: GTGGCTGCAACAAGGCACTAC KASP Assay Primer Allele Y: GGTGGCTGCAACAAGGCACTAT KASP Assay Primer Common: GAGTCTCGAATCTCAGCAGCATACTT	T/T	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 559F_410159	KASP Assay Primer Allele X: ACTTTCCAAAGCTAAATCCGAGAC KASP Assay Primer Allele Y: CTACTTTCCAAAGCTAAATCCGAGAA KASP Assay Primer Common: CATCCAGTTGGCTGCCAGTTATCTT	G/G	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 1037F_456722	KASP Assay Primer Allele X: AGAGGCAAGGTGCAACATAATA KASP Assay Primer Allele Y: CTAGAGGCAAGGTGCAACATAATG KASP Assay Primer Common: GCAGCGTAGTATCTGAGCTAGGATT	G/G	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 1345_507801	KASP Assay Primer Allele X: CACCAGCAGCAAGCTTGGAAC KASP Assay Primer Allele Y: GCACCAGCAGCAAGCTTGGAAT KASP Assay Primer Common: CGCCCAAAACATGGCCCTGGTA	C/C	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 1371F_177062	KASP Assay Primer Allele X: GGTAGCAGCAACAGCCCTCTT KASP Assay Primer Allele Y: GGTAGCAGCAACAGCCCTCTG KASP Assay Primer Common: GTTGGATGCACTGGAAATGGTTCCAT	A/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 1808F_307171	KASP Assay Primer Allele X: AACAGCTATTAAATATGTTGAGATCAGCT KASP Assay Primer Allele Y: AACAGCTATTAAATATGTTGAGATCAGCA KASP Assay Primer Common: CTGACCCACATAAGCAATTGGGCTA	A/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 2181F_220335	KASP Assay Primer Allele X: AAACAATTTCTCGTACTGAGCCCCA KASP Assay Primer Allele Y: CAATTTCTCGTACTGAGCCCCG KASP Assay Primer Common: CAGCCATATTTGTGAGGACGGCAAA	G/A	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 2814F_80926	KASP Assay Primer Allele X: GGTGCTGGATATGGAGGTGC KASP Assay Primer Allele Y: GTGGTGCTGGATATGGAGGTGA KASP Assay Primer Common: TCCACCAGCTCCATGACCACCT	G/G	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 2925F_116637	KASP Assay Primer Allele X: TAGCAGCGCCTACTCTGTG KASP Assay Primer Allele Y: GCTTAGCAGCGCCTACTCTGTA KASP Assay Primer Common: CCATGGAAGAGCTCGAGATGCTAAT	T/T	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 5441F_117067	KASP Assay Primer Allele X: GAAGCGGAGCTCGCCG KASP Assay Primer Allele Y: CCTGAAGCGGAGCTCGCCT KASP Assay Primer Common: TATCGGAGTTCTTATGGATTCCCTTTGAA	G/G	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available
MOLECULAR	HK 5449F_211727	KASP Assay Primer Allele X: AGATGCAGCATTTGACAAATACAACAAA KASP Assay Primer Allele Y: GATGCAGCATTTGACAAATACAACAAC KASP Assay Primer Common: TCTAATGAGGGCACCTACMCCTATAAT	NA	Driskill et al. 2021 unpublished-SNP data	CHUM 1386 .001 PL	Not Available

Genotype Data

Poly Type	Marker	Value	Evaluation	Study Type	Inventory
MICROSATELLITE	HLC-007	232 236	EUROPEAN.NORTH.AMERICAN.HUMULUS.SSR.2007	GDIVERSITY	CHUM 1386 .001 PL
MICROSATELLITE	HLC-006	282 282	EUROPEAN.NORTH.AMERICAN.HUMULUS.SSR.2007	GDIVERSITY	CHUM 1386 .001 PL
MICROSATELLITE	HLC-005B	182 186	EUROPEAN.NORTH.AMERICAN.HUMULUS.SSR.2007	GDIVERSITY	CHUM 1386 .001 PL
MICROSATELLITE	HLC-004B	237 239	EUROPEAN.NORTH.AMERICAN.HUMULUS.SSR.2007	GDIVERSITY	CHUM 1386 .001 PL
MICROSATELLITE	HLC-003A	423 426	EUROPEAN.NORTH.AMERICAN.HUMULUS.SSR.2007	GDIVERSITY	CHUM 1386 .001 PL
MICROSATELLITE	HLC-002B	196 200	EUROPEAN.NORTH.AMERICAN.HUMULUS.SSR.2007	GDIVERSITY	CHUM 1386 .001 PL
MICROSATELLITE	HLC-001D	244 262	EUROPEAN.NORTH.AMERICAN.HUMULUS.SSR.2007	GDIVERSITY	CHUM 1386 .001 PL
MICROSATELLITE	HLC-001A	134 146	EUROPEAN.NORTH.AMERICAN.HUMULUS.SSR.2007	GDIVERSITY	CHUM 1386 .001 PL